User:Michael Strong/H1N1/NS

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NS1 Protein Structural Homolgy Model


NS1 Polymorphisms
All Polymorphisms

NS1 Multiple Sequence Alignment
H1N1 Swine Flu Multiple Sequence Alignment of NS1 Protein, 53 sequences

gi|229598886_A/Texas/15/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKRRGNTL 50 gi|229892754_A/Canada-NS/RV153     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229536033_A/Minnesota/02/20     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229536107_A/Nebraska/02/200     MDSNTMSSFQVECFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229535811_A/Texas/09/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPLLDRLRRDQKSLKGRGNTL 50 gi|229396500_A/Ohio/07/2009        MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396477_A/New_York/19/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396402_A/New_York/31/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396413_A/New_York/23/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396387_A/New_York/18/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396449_A/New_York/15/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396351_A/New_York/12/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396373_A/New_York/11/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396433_A/New_York/10/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396363_A/New_York/06/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229484061_A/Canada-ON/RV152     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229535829_A/California/14/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229892761_A/Canada-ON/RV152     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229892770_A/Canada-ON/RV152     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229892764_A/Canada-AB/RV153     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|237511869_A/Mexico/4108/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|237511872_A/Mexico/4115/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|237511860_A/Mexico/4486/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|237511866_A/Mexico/4603/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|237511857_A/Mexico/4604/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229892767_A/Canada-NS/RV153     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229892758_A/Mexico/InDRE411     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229783375_A/Korea/01/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229783386_A/New_York/1669/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229783407_A/New_York/1682/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229536016_A/Arizona/01/2009     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229536115_A/Michigan/02/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229535991_A/South_Carolina/     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229462691_A/Castilla-La         MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229462727_A/Castilla-La         MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229462715_A/Pais_Vasco/GP20     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229462703_A/Valencia/GP4/20     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229484054_A/Canada-NS/RV153     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229484058_A/Mexico/InDRE448     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229368684_A/Denmark/513/200     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229396460_A/Texas/06/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229536007_A/Kansas/03/2009      MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227977123_A/California/08/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227977155_A/California/08/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227809839_A/California/04/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227977111_A/California/04/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|228017753_A/California/06/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227977143_A/California/07/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227977167_A/California/07/2     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229299532_A/Texas/04/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|227831789_A/Texas/05/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|229299512_A/Texas/05/2009       MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 gi|237624336_A/swine/Alberta/O     MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL 50 ***********:*******************:************ *****

gi|229598886_A/Texas/15/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229892754_A/Canada-NS/RV153     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEGMSR 100 gi|229536033_A/Minnesota/02/20     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSCYLSDMTLEEMSR 100 gi|229536107_A/Nebraska/02/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229535811_A/Texas/09/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396500_A/Ohio/07/2009        GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396477_A/New_York/19/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396402_A/New_York/31/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396413_A/New_York/23/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396387_A/New_York/18/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396449_A/New_York/15/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396351_A/New_York/12/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396373_A/New_York/11/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396433_A/New_York/10/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396363_A/New_York/06/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229484061_A/Canada-ON/RV152     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229535829_A/California/14/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229892761_A/Canada-ON/RV152     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229892770_A/Canada-ON/RV152     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229892764_A/Canada-AB/RV153     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|237511869_A/Mexico/4108/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|237511872_A/Mexico/4115/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|237511860_A/Mexico/4486/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|237511866_A/Mexico/4603/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|237511857_A/Mexico/4604/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229892767_A/Canada-NS/RV153     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229892758_A/Mexico/InDRE411     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229783375_A/Korea/01/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229783386_A/New_York/1669/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229783407_A/New_York/1682/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229536016_A/Arizona/01/2009     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229536115_A/Michigan/02/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229535991_A/South_Carolina/     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229462691_A/Castilla-La         GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229462727_A/Castilla-La         GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229462715_A/Pais_Vasco/GP20     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229462703_A/Valencia/GP4/20     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229484054_A/Canada-NS/RV153     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229484058_A/Mexico/InDRE448     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229368684_A/Denmark/513/200     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229396460_A/Texas/06/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229536007_A/Kansas/03/2009      GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227977123_A/California/08/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227977155_A/California/08/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227809839_A/California/04/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227977111_A/California/04/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|228017753_A/California/06/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227977143_A/California/07/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227977167_A/California/07/2     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229299532_A/Texas/04/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|227831789_A/Texas/05/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|229299512_A/Texas/05/2009       GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 gi|237624336_A/swine/Alberta/O     GLDIETATLVGKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSR 100 ************************************* ******** ***

gi|229598886_A/Texas/15/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229892754_A/Canada-NS/RV153     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229536033_A/Minnesota/02/20     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229536107_A/Nebraska/02/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229535811_A/Texas/09/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396500_A/Ohio/07/2009        DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396477_A/New_York/19/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396402_A/New_York/31/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396413_A/New_York/23/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396387_A/New_York/18/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396449_A/New_York/15/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396351_A/New_York/12/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396373_A/New_York/11/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396433_A/New_York/10/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396363_A/New_York/06/200     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229484061_A/Canada-ON/RV152     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229535829_A/California/14/2     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229892761_A/Canada-ON/RV152     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229892770_A/Canada-ON/RV152     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229892764_A/Canada-AB/RV153     DWFMLMPRQKIIGPLCVRLDQAVMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|237511869_A/Mexico/4108/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|237511872_A/Mexico/4115/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|237511860_A/Mexico/4486/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|237511866_A/Mexico/4603/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|237511857_A/Mexico/4604/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229892767_A/Canada-NS/RV153     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229892758_A/Mexico/InDRE411     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229783375_A/Korea/01/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229783386_A/New_York/1669/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229783407_A/New_York/1682/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229536016_A/Arizona/01/2009     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229536115_A/Michigan/02/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229535991_A/South_Carolina/     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229462691_A/Castilla-La         DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229462727_A/Castilla-La         DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229462715_A/Pais_Vasco/GP20     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229462703_A/Valencia/GP4/20     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229484054_A/Canada-NS/RV153     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229484058_A/Mexico/InDRE448     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229368684_A/Denmark/513/200     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229396460_A/Texas/06/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229536007_A/Kansas/03/2009      DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227977123_A/California/08/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227977155_A/California/08/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227809839_A/California/04/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227977111_A/California/04/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|228017753_A/California/06/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227977143_A/California/07/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227977167_A/California/07/2     DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229299532_A/Texas/04/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|227831789_A/Texas/05/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|229299512_A/Texas/05/2009       DWFMLMPRQKIIGPLCVRLDQAIMEKNIVLKANFSVIFNRLETLILLRAF 150 gi|237624336_A/swine/Alberta/O     DWFTLMPRQKIIGPLCVRLDQAIMEKNIVLKANISVIFNRLETLILLRAF 150 *** ******************:**********:****************

gi|229598886_A/Texas/15/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229892754_A/Canada-NS/RV153     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229536033_A/Minnesota/02/20     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229536107_A/Nebraska/02/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229535811_A/Texas/09/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396500_A/Ohio/07/2009        TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396477_A/New_York/19/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396402_A/New_York/31/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396413_A/New_York/23/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396387_A/New_York/18/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396449_A/New_York/15/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396351_A/New_York/12/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396373_A/New_York/11/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396433_A/New_York/10/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396363_A/New_York/06/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229484061_A/Canada-ON/RV152     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229535829_A/California/14/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229892761_A/Canada-ON/RV152     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229892770_A/Canada-ON/RV152     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229892764_A/Canada-AB/RV153     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|237511869_A/Mexico/4108/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|237511872_A/Mexico/4115/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|237511860_A/Mexico/4486/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|237511866_A/Mexico/4603/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|237511857_A/Mexico/4604/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229892767_A/Canada-NS/RV153     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229892758_A/Mexico/InDRE411     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229783375_A/Korea/01/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229783386_A/New_York/1669/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229783407_A/New_York/1682/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229536016_A/Arizona/01/2009     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229536115_A/Michigan/02/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229535991_A/South_Carolina/     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229462691_A/Castilla-La         TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229462727_A/Castilla-La         TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229462715_A/Pais_Vasco/GP20     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229462703_A/Valencia/GP4/20     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229484054_A/Canada-NS/RV153     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229484058_A/Mexico/InDRE448     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229368684_A/Denmark/513/200     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229396460_A/Texas/06/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229536007_A/Kansas/03/2009      TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227977123_A/California/08/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227977155_A/California/08/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227809839_A/California/04/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227977111_A/California/04/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|228017753_A/California/06/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227977143_A/California/07/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227977167_A/California/07/2     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229299532_A/Texas/04/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|227831789_A/Texas/05/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|229299512_A/Texas/05/2009       TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 gi|237624336_A/swine/Alberta/O     TEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIGGLEWNGNTVRVSENIQR 200 **************************************************

gi|229598886_A/Texas/15/2009       FAWRNCDENGRPSLPPEQK 219 gi|229892754_A/Canada-NS/RV153     FAWRNCDENGRPSLPPEQK 219 gi|229536033_A/Minnesota/02/20     FAWRNCDENGRPSLPPEQK 219 gi|229536107_A/Nebraska/02/200     FAWRNCDENGRPSLPPEQK 219 gi|229535811_A/Texas/09/2009       FAWRNCDENGRPSLPPEQK 219 gi|229396500_A/Ohio/07/2009        FAWRNCDENGRPSLPPEQK 219 gi|229396477_A/New_York/19/200     FAWRNCDENGRPSLPPEQK 219 gi|229396402_A/New_York/31/200     FAWRNCDENGRPSLPPEQK 219 gi|229396413_A/New_York/23/200     FAWRNCDENGRPSLPPEQK 219 gi|229396387_A/New_York/18/200     FAWRNCDENGRPSLPPEQK 219 gi|229396449_A/New_York/15/200     FAWRNCDENGRPSLPPEQK 219 gi|229396351_A/New_York/12/200     FAWRNCDENGRPSLPPEQK 219 gi|229396373_A/New_York/11/200     FAWRNCDENGRPSLPPEQK 219 gi|229396433_A/New_York/10/200     FAWRNCDENGRPSLPPEQK 219 gi|229396363_A/New_York/06/200     FAWRNCDENGRPSLPPEQK 219 gi|229484061_A/Canada-ON/RV152     FAWRNCDENGRPSLPPEQK 219 gi|229535829_A/California/14/2     FAWRNCDENGRPSLPPEQK 219 gi|229892761_A/Canada-ON/RV152     FAWRNCDENGRPSLPPEQK 219 gi|229892770_A/Canada-ON/RV152     FAWRNCDENGRPSLPPEQK 219 gi|229892764_A/Canada-AB/RV153     FAWRNCDENGRPSLPPEQK 219 gi|237511869_A/Mexico/4108/200     FAWRNCDENGRPSLPPEQK 219 gi|237511872_A/Mexico/4115/200     FAWRNCDENGRPSLPPEQK 219 gi|237511860_A/Mexico/4486/200     FAWRNCDENGRPSLPPEQK 219 gi|237511866_A/Mexico/4603/200     FAWRNCDENGRPSLPPEQK 219 gi|237511857_A/Mexico/4604/200     FAWRNCDENGRPSLPPEQK 219 gi|229892767_A/Canada-NS/RV153     FAWRNCDENGRPSLPPEQK 219 gi|229892758_A/Mexico/InDRE411     FAWRNCDENGRPSLPPEQK 219 gi|229783375_A/Korea/01/2009       FAWRNCDENGRPSLPPEQK 219 gi|229783386_A/New_York/1669/2     FAWRNCDENGRPSLPPEQK 219 gi|229783407_A/New_York/1682/2     FAWRNCDENGRPSLPPEQK 219 gi|229536016_A/Arizona/01/2009     FAWRNCDENGRPSLPPEQK 219 gi|229536115_A/Michigan/02/200     FAWRNCDENGRPSLPPEQK 219 gi|229535991_A/South_Carolina/     FAWRNCDENGRPSLPPEQK 219 gi|229462691_A/Castilla-La         FAWRNCDENGRPSLPPEQK 219 gi|229462727_A/Castilla-La         FAWRNCDENGRPSLPPEQK 219 gi|229462715_A/Pais_Vasco/GP20     FAWRNCDENGRPSLPPEQK 219 gi|229462703_A/Valencia/GP4/20     FAWRNCDENGRPSLPPEQK 219 gi|229484054_A/Canada-NS/RV153     FAWRNCDENGRPSLPPEQK 219 gi|229484058_A/Mexico/InDRE448     FAWRNCDENGRPSLPPEQK 219 gi|229368684_A/Denmark/513/200     FAWRNCDENGRPSLPPEQK 219 gi|229396460_A/Texas/06/2009       FAWRNCDENGRPSLPPEQK 219 gi|229536007_A/Kansas/03/2009      FAWRNCDENGRPSLPPEQK 219 gi|227977123_A/California/08/2     FAWRNCDENGRPSLPPEQK 219 gi|227977155_A/California/08/2     FAWRNCDENGRPSLPPEQK 219 gi|227809839_A/California/04/2     FAWRNCDENGRPSLPPEQK 219 gi|227977111_A/California/04/2     FAWRNCDENGRPSLPPEQK 219 gi|228017753_A/California/06/2     FAWRNCDENGRPSLPPEQK 219 gi|227977143_A/California/07/2     FAWRNCDENGRPSLPPEQK 219 gi|227977167_A/California/07/2     FAWRNCDENGRPSLPPEQK 219 gi|229299532_A/Texas/04/2009       FAWRNCDENGRPSLPPEQK 219 gi|227831789_A/Texas/05/2009       FAWRNCDENGRPSLPPEQK 219 gi|229299512_A/Texas/05/2009       FAWRNCDENGRPSLPPEQK 219 gi|237624336_A/swine/Alberta/O     FAWRNCDENGRPSLPPEQK 219 *******************

NS1 BLAST
>gb|AAL87905.1|AF455711_1 nonstructural protein 1 [Influenza A virus (A/Swine/Iowa/930/01(H1N2))] Length=219

Score = 432 bits (1111),  Expect = 1e-119, Method: Compositional matrix adjust. Identities = 207/219 (94%), Positives = 217/219 (99%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMT+EEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTIEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRNC+E+GRPSLPP+QK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNCNEDGRPSLPPKQK  219

>gb|AAD51273.1|AF153261_1 NS1 [Influenza A virus (A/Swine/Texas/4199-2/98(H3N2))] gb|AAD51275.1|AF153262_1 NS1 [influenza A virus (A/Swine/Minnesota/9088-2/98 (H3N2))] Length=219

Score = 430 bits (1105),  Expect = 6e-119, Method: Compositional matrix adjust. Identities = 208/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAF75999.1|AF250128_2 NS1 [influenza A virus (A/Swine/Indiana/9K035/99 (H1N2))] Length=219

Score = 429 bits (1102),  Expect = 1e-118, Method: Compositional matrix adjust. Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVG+ Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGI  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +ENGRPSL PEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNENGRPSLSPEQK  219

>gb|AAL29798.1| nonstructural protein [Influenza A virus (A/SW/IN/14810-T/01(H1N2))] gb|AAL29799.1| nonstructural protein [Influenza A virus (A/SW/IN/14810-S/01(H1N2))] Length=219

Score = 429 bits (1102),  Expect = 1e-118, Method: Compositional matrix adjust. Identities = 207/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTL+EMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLKEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ABI54396.1| nonstructural protein [Influenza A virus (A/swine/Korea/PZ72-1/2006(H3N1))] gb|ABI54397.1| nonstructural protein [Influenza A virus (A/swine/Korea/CN22/2006(H3N1))] Length=219

Score = 428 bits (1101),  Expect = 2e-118, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAF+EEGAIVGEISPLPSLPGHT EDVKNA+GV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFSEEGAIVGEISPLPSLPGHTNEDVKNAIGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 L+GGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LVGGLEWNGNTVRGSENLQRFAWRNHNEDGRPSLPPEQK  219

>gb|ABA27444.1| nonstructural protein [Influenza A virus (A/swine/IN/PU542/04 (H3N1))] Length=219

Score = 428 bits (1100),  Expect = 2e-118, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNT+GLDIETATL+ Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTIGLDIETATLI  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSV+FNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVVFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAK71694.1| nonstructural protein 1 [Influenza A virus (A/Turkey/MO/24093/99(H1N2))] Length=219

Score = 428 bits (1100),  Expect = 2e-118, Method: Compositional matrix adjust. Identities = 207/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAD51277.1|AF153263_1 NS1 [influenza A virus (A/Swine/Iowa/8548-1/98)] Length=219

Score = 428 bits (1100),  Expect = 2e-118, Method: Compositional matrix adjust. Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ACH69556.1| nonstructural protein 1 [Influenza A virus (A/swine/OH/511445/2007(H1N1))] Length=219

Score = 428 bits (1100),  Expect = 2e-118, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWIL+EESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGP CV++D Sbjct 61   GKQIVEWILREESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPFCVQMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +ENGRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNENGRPSLPPEQK  219

>gb|AAL87903.1|AF455710_1 nonstructural protein 1 [Influenza A virus (A/Swine/Minnesota/55551/00 (H1N2))] Length=219

Score = 428 bits (1100),  Expect = 2e-118, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LC+R+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCMRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGE+SPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEVSPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ACD88664.1| nonstructural protein 1 [Influenza A virus (A/turkey/OH/313053/2004(H3N2))] Length=219

Score = 428 bits (1100),  Expect = 2e-118, Method: Compositional matrix adjust. Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAD51271.1|AF153260_1 NS1 [influenza A virus (A/Swine/North Carolina/35922/98 (H3N2))] Length=219

Score = 428 bits (1100),  Expect = 2e-118, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKN++LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNA+GV Sbjct 121  QAIMEKNLILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAIGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAL87901.1|AF455709_1 nonstructural protein 1 [Influenza A virus (A/Swine/North Carolina/93523/01 (H1N2))] Length=219

Score = 428 bits (1100),  Expect = 2e-118, Method: Compositional matrix adjust. Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTEEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRV EN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVPENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAL87897.1|AF455707_1 nonstructural protein 1 [Influenza A virus (A/Swine/Ohio/891/01(H1N2))] Length=219

Score = 427 bits (1099),  Expect = 2e-118, Method: Compositional matrix adjust. Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDW MLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWLMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAG01763.1|AF251408_1 nonstructural protein 1 [Influenza A virus (A/Swine/Nebraska/209/98 (H3N2))] Length=219

Score = 427 bits (1099),  Expect = 3e-118, Method: Compositional matrix adjust. Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIMLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ACE78051.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CAN04/2005(H3N2))] gb|ACE78053.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CAS07/2005(H3N2))] gb|ACE78055.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CAS09/2006(H3N2))] Length=219

Score = 427 bits (1098),  Expect = 3e-118, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLE LILLRAFTEEGAIVGEISPLPSLPGHT EDVKNA+GV Sbjct 121  QAIMEKNIILKANFSVIFNRLEILILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAIGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAL29792.1| nonstructural protein [Influenza A virus (A/SW/MN/3327/00(H1N2))] Length=219

Score = 427 bits (1098),  Expect = 3e-118, Method: Compositional matrix adjust. Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEE SETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEEPSETLKMTIASVPTSRYLTDMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ABQ41893.1| nonstructural protein 1 [Influenza A virus (A/turkey/Illinois/2004(H3N2))] gb|ABQ41903.1| nonstructural protein 1 [Influenza A virus (A/swine/North Carolina/2003(H3N2))] Length=219

Score = 427 bits (1098),  Expect = 4e-118, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRK+FADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKQFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKE+SSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEKSSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ACD35877.1| nonstructural protein 1 [Influenza A virus (A/turkey/North Carolina/353568/2005(H3N2))] gb|ACD88653.1| nonstructural protein 1 [Influenza A virus (A/turkey/NC/353568/2005(H3N2))] Length=219

Score = 427 bits (1097),  Expect = 4e-118, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETL+LLRAFTEEGAIVGE+SPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLVLLRAFTEEGAIVGEVSPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAL87899.1|AF455708_1 nonstructural protein 1 [Influenza A virus (A/Swine/North Carolina/98225/01(H1N2))] Length=219

Score = 427 bits (1097),  Expect = 4e-118, Method: Compositional matrix adjust. Identities = 207/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIM KNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMGKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ABG34250.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/S5/2005(H1N2))] Length=219

Score = 427 bits (1097),  Expect = 5e-118, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTS YL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSHYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFN+LETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNQLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ACE78029.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CAS08/2005(H1N1))] Length=219

Score = 427 bits (1097),  Expect = 5e-118, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT +DVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNKDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRF WRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFTWRNRNEDGRPSLPPEQK  219

>gb|AAV80805.1| nonstructural protein 1 [Influenza A virus (A/turkey/North Carolina/12344/03(H3N2))] Length=219

Score = 426 bits (1096),  Expect = 5e-118, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQ+IIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQRIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAI EKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAITEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ABF17984.1| nonstructural protein 1 [Influenza A virus (A/Ontario/RV1273/2005(H3N2))] gb|ABF17986.1| nonstructural protein 1 [Influenza A virus (A/swine/Alberta/14722/2005(H3N2))] gb|ABF17990.1| nonstructural protein 1 [Influenza A virus (A/swine/Manitoba/12707/2005(H3N2))] gb|ABF17992.1| nonstructural protein 1 [Influenza A virus (A/swine/Ontario/33853/2005(H3N2))] gb|ABF17994.1| nonstructural protein 1 [Influenza A virus (A/turkey/Ontario/31232/2005(H3N2))] gb|ACF04397.1| nonstructural protein 1 [Influenza A virus (A/swine/Quebec/4001/2005(H3N2))] Length=219

Score = 426 bits (1096),  Expect = 5e-118, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ACF25591.1| nonstructural protein 1 [Influenza A virus (A/turkey/IA/21089-3/1992(H1N1))] Length=219

Score = 426 bits (1096),  Expect = 6e-118, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAN46831.1| nonstructural protein [Influenza A virus (A/Swine/Korea/CY02/02(H1N2))] Length=219

Score = 426 bits (1095),  Expect = 7e-118, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIET TLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETVTLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SE++QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSESLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAL29791.1| nonstructural protein [Influenza A virus (A/SW/MN/12883/00(H1N2))] Length=219

Score = 426 bits (1095),  Expect = 7e-118, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKN +LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNTILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ABC59713.1| nonstructural protein [Influenza A virus (A/turkey/Ohio/313053/04(H3N2))] Length=219

Score = 426 bits (1095),  Expect = 8e-118, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+IGPLC R+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKVIGPLCARMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ABA46963.1| NS1 [Influenza A virus (A/swine/Minnesota/00395/2004(H3N1))] Length=219

Score = 426 bits (1095),  Expect = 8e-118, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGL+IETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLNIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNA+GV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAIGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRF WRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFTWRNRNEDGRPSLPPEQK  219

>gb|AAL29793.1| nonstructural protein [Influenza A virus (A/SW/MN/22860-T/01(H1N2))] gb|AAL29794.1| nonstructural protein [Influenza A virus (A/SW/MN/22860-S/01(H1N2))] Length=219

Score = 426 bits (1094),  Expect = 9e-118, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKII LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIISSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIF RLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFTRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAG01772.1|AF251416_1 nonstructural protein 1 [Influenza A virus (A/Swine/Iowa/533/99 (H3N2))] gb|AAG01790.1|AF251432_1 nonstructural protein 1 [Influenza A virus (A/Swine/Minnesota/593/99 (H3N2))] gb|AAL29812.1| nonstructural protein [Influenza A virus (A/SW/NC/45319/99(H1N2))] Length=219

Score = 426 bits (1094),  Expect = 1e-117, Method: Compositional matrix adjust. Identities = 206/219 (94%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIMLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|ABF17988.1| nonstructural protein 1 [Influenza A virus (A/swine/British Columbia/28103/2005(H3N2))] Length=219

Score = 425 bits (1092),  Expect = 2e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLE LILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLEALILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAO92928.1| nonstructural protein 1 [Influenza A virus (A/Chicken/NY/21665-73/98(H7N2))] Length=219

Score = 425 bits (1092),  Expect = 2e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MT ASVPTSRYL+D+TLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTTASVPTSRYLADITLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVS+N+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSKNLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAC36140.1| nonstructural protein [Influenza A virus (A/swine/Iowa/17672/1988(H1N1))] gb|ABR29600.1| nonstructural protein 1 [Influenza A virus (A/swine/Iowa/17672/1988(H1N1))] gb|ABW71526.1| nonstructural protein 1 [Influenza A virus (A/swine/Iowa/24297/1991(H1N1))] Length=219

Score = 424 bits (1091),  Expect = 2e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|AAL87909.1|AF455713_1 nonstructural protein 1 [Influenza A virus (A/Swine/Illinois/100085A/01 (H1N2))] gb|AAL87911.1|AF455714_1 nonstructural protein 1 [Influenza A virus (A/Swine/Illinois/100084/01 (H1N2))] Length=219

Score = 424 bits (1091),  Expect = 2e-117, Method: Compositional matrix adjust. Identities = 204/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDW MLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWLMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFN+LETLILLRAFTE+GAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNQLETLILLRAFTEQGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+G+PSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGKPSLPPEQK  219

>gb|AAV80808.1| nonstructural protein 1 [Influenza A virus (A/turkey/Minnesota/764-2/03(H3N2))] Length=219

Score = 424 bits (1091),  Expect = 2e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQ+IIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQRIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAI EKNI+LKANFSVIFNRLETLILLRAFTEEGA VGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAITEKNIILKANFSVIFNRLETLILLRAFTEEGASVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ABA27436.1| nonstructural protein [Influenza A virus (A/swine/MI/PU243/04 (H3N1))] Length=219

Score = 424 bits (1090),  Expect = 2e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTS YL+DMTLEEMSRDWFMLMPRQKIIGPLCV++D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSSYLADMTLEEMSRDWFMLMPRQKIIGPLCVQMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ACD88708.1| nonstructural protein 1 [Influenza A virus (A/turkey/NC/19762/1988(H1N1))] Length=219

Score = 424 bits (1090),  Expect = 3e-117, Method: Compositional matrix adjust. Identities = 204/219 (93%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATL+ Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLI  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|ABG34257.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/S11/2005(H1N2))] Length=219

Score = 424 bits (1090),  Expect = 3e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTS YL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSHYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANF VIFN+LETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFIVIFNQLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ABR29570.1| nonstructural protein 1 [Influenza A virus (A/swine/Maryland/23239/1991(H1N1))] Length=219

Score = 424 bits (1090),  Expect = 3e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRV EN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVPENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ACF25601.1| nonstructural protein 1 [Influenza A virus (A/turkey/IA/10271-3/1990(H1N1))] Length=219

Score = 424 bits (1089),  Expect = 4e-117, Method: Compositional matrix adjust. Identities = 204/219 (93%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMT+EEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTIEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|ACD65215.1| nonstructural protein 1 [Influenza A virus (A/swine/Ohio/24366/07(H1N1))] Length=217

Score = 424 bits (1089),  Expect = 4e-117, Method: Compositional matrix adjust. Identities = 204/217 (94%), Positives = 213/217 (98%), Gaps = 0/217 (0%)

Query 3    SNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLVGK  62 SNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLVGK Sbjct 1    SNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLVGK  60

Query 63   QIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLDQA  122 QIVEWIL+EESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGP CV++DQA Sbjct 61   QIVEWILREESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPFCVQMDQA  120

Query 123  IMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGVLI  182 IMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGVLI Sbjct 121  IMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGVLI  180

Query 183  GGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 GGLEWNGNTVR SEN+QRFAWRN +ENGRPSLPPEQK Sbjct 181  GGLEWNGNTVRGSENLQRFAWRNRNENGRPSLPPEQK  217

>gb|AAL29811.1| nonstructural protein [Influenza A virus (A/SW/OH/7802/00(H1N2))] Length=219

Score = 424 bits (1089),  Expect = 4e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKR ADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRLADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIMLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|AAL29807.1| nonstructural protein [Influenza A virus (A/SW/NE/21147/01(H1N2))] gb|AAL29808.1| nonstructural protein [Influenza A virus (A/SW/MN/34893/01(H1N2))] gb|AAL29809.1| nonstructural protein [Influenza A virus (A/SW/NE/18339/01(H1N2))] gb|AAL29810.1| nonstructural protein [Influenza A virus (A/SW/MN/13130/00(H1N2))] Length=219

Score = 423 bits (1088),  Expect = 4e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDC LWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCSLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MT ASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTNASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 L+GGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LVGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAL29795.1| nonstructural protein [Influenza A virus (A/SW/MN/3128/00(H1N2))] Length=219

Score = 423 bits (1088),  Expect = 4e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QA+MEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAMMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +E+GR LPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRSPLPPEQK  219

>gb|ACE78027.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CAN01/2004(H1N1))] Length=219

Score = 423 bits (1088),  Expect = 5e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHI KRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIPKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT +DVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNKDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRF WRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFTWRNRNEDGRPSLPPEQK  219

>gb|AAO88260.1| nonstructural protein 1 [Influenza A virus (A/Wisconsin/10/98 (H1N1))] Length=219

Score = 423 bits (1088),  Expect = 5e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDS T+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSTTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+ MTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLAGMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAI+EKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAILEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ABY81725.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/JNS06/2004(H3N2))] Length=219

Score = 423 bits (1088),  Expect = 5e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFA+NGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFANNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSE++QRFAWR+ +EN RPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSEDLQRFAWRSRNENERPSLPPEQK  219

>gb|ACD35870.1| nonstructural protein 1 [Influenza A virus (A/turkey/Minnesota/366767/2005(H3N2))] gb|ACF25537.1| nonstructural protein 1 [Influenza A virus (A/turkey/MN/366767/2005(H3N2))] Length=219

Score = 423 bits (1088),  Expect = 5e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRK FADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKLFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAL29790.1| nonstructural protein [Influenza A virus (A/SW/AR/12491/00(H1N2))] Length=219

Score = 423 bits (1088),  Expect = 5e-117, Method: Compositional matrix adjust. Identities = 204/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKG GNTLGLD ETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGSGNTLGLDTETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+IG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKMIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ACI41027.1| nonstructural protein 1 [Influenza A virus (A/turkey/NC/17026/1988(H1N1))] Length=219

Score = 423 bits (1087),  Expect = 6e-117, Method: Compositional matrix adjust. Identities = 203/219 (92%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATL+ Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLI  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMP+QKIIG LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPKQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|AAL29796.1| nonstructural protein [Influenza A virus (A/SW/KS/13481-T/00(H1N2))] gb|AAL29797.1| nonstructural protein [Influenza A virus (A/SW/KS/13481-S/00(H1N2))] Length=219

Score = 423 bits (1087),  Expect = 6e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT E+VKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDENVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGG EWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGPEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ACE78031.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/Hongsong2/2004(H1N2))] gb|ACE78033.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/JL01/2005(H1N2))] gb|ACE78037.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/JL04/2005(H1N2))] gb|ACE78039.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/Asan04/2006(H1N2))] Length=219

Score = 422 bits (1086),  Expect = 8e-117, Method: Compositional matrix adjust. Identities = 204/219 (93%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAI EKNI+LKANFSVIFNRLE LILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVG Sbjct 121  QAITEKNIILKANFSVIFNRLENLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGA  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAU25874.1| nonstructural protein 1 [Influenza A virus (A/Swine/Wisconsin/238/97(H1N1))] Length=219

Score = 422 bits (1086),  Expect = 9e-117, Method: Compositional matrix adjust. Identities = 205/219 (93%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIME NI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMENNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRP LP EQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPPLPSEQK  219

>gb|AAL87907.1|AF455712_1 nonstructural protein 1 [Influenza A virus (A/Swine/Indiana/P12439/00 (H1N2))] Length=219

Score = 422 bits (1085),  Expect = 9e-117, Method: Compositional matrix adjust. Identities = 204/219 (93%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVP SRYL+DMTLEEMSRDWFMLMPRQKII LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPNSRYLADMTLEEMSRDWFMLMPRQKIIRSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAI+GEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIIGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ABR87891.1| nonstructural protein 1 [Influenza A virus (A/swine/Guangxi/13/2006(H1N2))] Length=219

Score = 422 bits (1085),  Expect = 1e-116, Method: Compositional matrix adjust. Identities = 203/219 (92%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAI+EKNI+LKANFSVIFNRLETL+LLRAFTE GAIVGEISPLPSLPGHT EDVKNAVG+ Sbjct 121  QAIIEKNIILKANFSVIFNRLETLVLLRAFTEGGAIVGEISPLPSLPGHTDEDVKNAVGI  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ACI26609.1| nonstructural protein 1 [Influenza A virus (A/swine/Memphis/1/1990(H1N1))] Length=219

Score = 422 bits (1084),  Expect = 1e-116, Method: Compositional matrix adjust. Identities = 204/219 (93%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEE +ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEEFNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|ABI19009.1| nonstructural protein 1 [Influenza A virus (A/Iowa/CEID23/2005(H1N1))] Length=219

Score = 422 bits (1084),  Expect = 1e-116, Method: Compositional matrix adjust. Identities = 202/219 (92%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDS T+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSTTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSR+WFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRNWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSV+FNRLETLILLRAFTEEG +VGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVVFNRLETLILLRAFTEEGTVVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ABR29590.1| nonstructural protein 1 [Influenza A virus (A/swine/Wisconsin/1915/1988(H1N1))] Length=219

Score = 422 bits (1084),  Expect = 1e-116, Method: Compositional matrix adjust. Identities = 203/219 (92%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKE+S+ETL+M IASVPTSRYL+DM LEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEDSNETLKMAIASVPTSRYLADMALEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +ENGRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNENGRPSLPPEQK  219

>gb|AAB51007.1| nonstructural protein NS1 [Influenza A virus (A/swine/Hong Kong/273/1994(H1N1))] Length=218

Score = 421 bits (1083),  Expect = 2e-116, Method: Compositional matrix adjust. Identities = 203/218 (93%), Positives = 215/218 (98%), Gaps = 0/218 (0%)

Query 2    DSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLVG  61 DSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+T+GLDIETATLVG Sbjct 1    DSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTIGLDIETATLVG  60

Query 62   KQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLDQ  121 KQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+DQ Sbjct 61   KQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMDQ  120

Query 122  AIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGVL  181 AIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGVL Sbjct 121  AIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGVL  180

Query 182  IGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 IGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  IGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  218

>gb|AAU25872.1| nonstructural protein 1 [Influenza A virus (A/Swine/Wisconsin/458/98(H1N1))] gb|ABB86952.1| nonstructural protein 1 [Influenza A virus (A/swine/Wisconsin/464/98(H1N1))] Length=219

Score = 421 bits (1083),  Expect = 2e-116, Method: Compositional matrix adjust. Identities = 203/219 (92%), Positives = 216/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWF+LMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFILMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFT+EGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTKEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|AAL29800.1| nonstructural protein [Influenza A virus (A/SW/MN/16356/01(H1N2))] Length=219

Score = 421 bits (1083),  Expect = 2e-116, Method: Compositional matrix adjust. Identities = 204/219 (93%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSE L+MTIAS+PTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSEILKMTIASIPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPS PPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSPPPEQK  219

>gb|AAL29804.1| nonstructural protein [Influenza A virus (A/SW/CO/17871/01(H1N2))] Length=219

Score = 421 bits (1082),  Expect = 2e-116, Method: Compositional matrix adjust. Identities = 203/219 (92%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPF+DRLRRDQKSLKGRGNTLG+DIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFIDRLRRDQKSLKGRGNTLGIDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+D+TLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADITLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIM KNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMGKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +E+GRPSL PEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNEDGRPSLSPEQK  219

>gb|AAB03300.1| NS [Influenza A virus (A/WI/4755/1994(H1N1))] Length=219

Score = 421 bits (1082),  Expect = 2e-116, Method: Compositional matrix adjust. Identities = 203/219 (92%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+M IASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMAIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|ACI48766.1| nonstructural protein 1 [Influenza A virus (A/swine/Shanghai/1/2007(H1N2))] Length=219

Score = 421 bits (1082),  Expect = 2e-116, Method: Compositional matrix adjust. Identities = 202/219 (92%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRK+FADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKQFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAI+EKNI+LKANFSVIFNRLETL+LLRAFTE GAIVGEISPLPSLPGHT EDVKNAVG+ Sbjct 121  QAIIEKNIILKANFSVIFNRLETLVLLRAFTEGGAIVGEISPLPSLPGHTDEDVKNAVGI  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ACF04387.1| nonstructural protein 1 [Influenza A virus (A/mink/Nova Scotia/1055488/2007(H3N2))] Length=219

Score = 421 bits (1081),  Expect = 3e-116, Method: Compositional matrix adjust. Identities = 204/219 (93%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWN NTVR SEN+QRFAWRN +E+GR SLPPEQK Sbjct 181  LIGGLEWNDNTVRGSENLQRFAWRNRNEDGRSSLPPEQK  219

>gb|ACE78035.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/JL02/2005(H1N2))] gb|ACE78041.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/PZ4/2006(H1N2))] gb|ACE78043.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/PZ7/2006(H1N2))] gb|ACE78045.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/PZ14/2006(H1N2))] gb|ACE78047.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CY08/2007(H1N2))] Length=219

Score = 421 bits (1081),  Expect = 3e-116, Method: Compositional matrix adjust. Identities = 204/219 (93%), Positives = 212/219 (96%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKR ADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRVADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAI EKNI+LKANFSVIFNRLE LILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAITEKNIILKANFSVIFNRLENLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSL PEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLSPEQK  219

>gb|AAO65608.1| nonstructural protein 1 [Influenza A virus (A/duck/NC/91347/01(H1N2))] Length=219

Score = 420 bits (1080),  Expect = 4e-116, Method: Compositional matrix adjust. Identities = 202/219 (92%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFAD+GLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATL Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADDGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLA  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIM KNI+LKANFSVIFNRLETL+LLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMGKNIILKANFSVIFNRLETLVLLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR+SE++QRFAWRN +E GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRISEDLQRFAWRNRNEGGRPSLPPEQK  219

>gb|ACK99415.1| nonstructural protein 1 [Influenza A virus (A/swine/Wisconsin/30954/1976(H1N1))] Length=219

Score = 419 bits (1078),  Expect = 6e-116, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATL Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLA  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVP+SRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPSSRYLADMTLEEMSRDWFMLMPRQKVAGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+C+ENGRP LPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSCNENGRPPLPPEQK  219

>gb|ABY84689.1| nonstructural protein 1 [Influenza A virus (A/swine/California/T9001707/1991(H1N1))] Length=219

Score = 419 bits (1078),  Expect = 8e-116, Method: Compositional matrix adjust. Identities = 203/219 (92%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEE +ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEEFNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSL PEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLSPEQK  219

>gb|AAR90878.1| nonstructural protein [Influenza A virus (A/swine/Pingtung/7-12/1999(H1N2))] Length=219

Score = 419 bits (1077),  Expect = 8e-116, Method: Compositional matrix adjust. Identities = 202/219 (92%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFAD+GLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADSGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVRLD Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRLD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFN+LETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNQLETLILLRAFTEEGAIVGEISPLLSLPGHTGEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+C+ENGRPSL PEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSCNENGRPSLSPEQK  219

>gb|AAL29802.1| nonstructural protein [Influenza A virus (A/SW/MN/17138/01(H1N2))] Length=219

Score = 419 bits (1076),  Expect = 1e-115, Method: Compositional matrix adjust. Identities = 203/219 (92%), Positives = 212/219 (96%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSE L+MTIAS+PTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSEILKMTIASIPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVK AVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKIAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWN NTVR SEN+QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNSNTVRGSENLQRFAWRNRNEDGRPSLPPEQK  219

>gb|AAB50997.1| nonstructural protein NS1 [Influenza A virus (A/swine/Iowa/17672/1988(H1N1))] Length=216

Score = 419 bits (1076),  Expect = 1e-115, Method: Compositional matrix adjust. Identities = 202/216 (93%), Positives = 213/216 (98%), Gaps = 0/216 (0%)

Query 4    NTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLVGKQ  63 NT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGLDIETATLVGKQ Sbjct 1    NTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLDIETATLVGKQ  60

Query 64   IVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLDQAI  123 IVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+DQAI Sbjct 61   IVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMDQAI  120

Query 124  MEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGVLIG  183 MEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGVLIG Sbjct 121  MEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGVLIG  180

Query 184  GLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 GLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  GLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  216

>gb|ABY70962.1| nonstructural protein 1 [Influenza A virus (A/Ontario/1252/2007(H3N2))] Length=219

Score = 418 bits (1075),  Expect = 1e-115, Method: Compositional matrix adjust. Identities = 202/219 (92%), Positives = 212/219 (96%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTL LDI TATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLSLDIGTATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSV+FNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVVFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRF WRN +E+GRPSLP EQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFTWRNRNEDGRPSLPSEQK  219

>gb|AAB03299.1| NS [Influenza A virus (A/WI/4754/1994(H1N1))] Length=219

Score = 418 bits (1075),  Expect = 2e-115, Method: Compositional matrix adjust. Identities = 202/219 (92%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLG DIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGPDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+M IASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMAIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|AAL29803.1| nonstructural protein [Influenza A virus (A/SW/NC/17366/01(H1N2))] Length=219

Score = 418 bits (1074),  Expect = 2e-115, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGD PFLDRLRRDQKSLKGRG TLGLDI+TATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDVPFLDRLRRDQKSLKGRGTTLGLDIKTATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGE+SPLPSLPGHT ED+KNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEVSPLPSLPGHTDEDIKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSE++QRFAWRN +E+GR SLPPEQK Sbjct 181  LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRSSLPPEQK  219

>gb|ABY40427.1| nonstructural protein 1 [Influenza A virus (A/swine/Missouri/2124514/2006(H2N3))] Length=219

Score = 417 bits (1073),  Expect = 3e-115, Method: Compositional matrix adjust. Identities = 201/219 (91%), Positives = 212/219 (96%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDS T+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSTTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEEMSRDW MLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEMSRDWLMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEG IVGEIS LPSLPGHT EDVKNA+GV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGTIVGEISQLPSLPGHTNEDVKNAIGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPE+K Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEKK  219

>gb|AAG01781.1|AF251424_1 nonstructural protein 1 [Influenza A virus (A/Swine/Iowa/569/99 (H3N2))] Length=219

Score = 417 bits (1072),  Expect = 3e-115, Method: Compositional matrix adjust. Identities = 203/219 (92%), Positives = 212/219 (96%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDS + SFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSPLVPSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQKI G LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKITGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIMLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|ACF17154.1| nonstructural protein 1 [Influenza A virus (A/swine/Hainan/1/2005(H1N2))] Length=219

Score = 417 bits (1072),  Expect = 4e-115, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRK+FADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIE ATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKQFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIEKATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWF+LMPRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFILMPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAI+EKNI+LKANFSVIFNRLETL+LLRAFTE GAIVGEISPLPSLPGHT EDVKNAVG+ Sbjct 121  QAIIEKNIILKANFSVIFNRLETLVLLRAFTEGGAIVGEISPLPSLPGHTDEDVKNAVGI  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ACE78061.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CY07/2007(H3N2))] Length=219

Score = 417 bits (1071),  Expect = 4e-115, Method: Compositional matrix adjust. Identities = 202/219 (92%), Positives = 210/219 (95%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG TLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGITLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSET +M IASVPTSRYL+DMTLEEMSRDWFMLMPRQK IG LCVR+D Sbjct 61   GKQIVEWILKEESSETHKMIIASVPTSRYLADMTLEEMSRDWFMLMPRQKTIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKN++LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAV V Sbjct 121  QAIMEKNVILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVEV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +ENGRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRSSENLQRFAWRNRNENGRPSLPPEQK  219

>gb|ACF17149.1| nonstructural protein 1 [Influenza A virus (A/swine/Guangxi/17/2005(H1N2))] Length=219

Score = 417 bits (1071),  Expect = 5e-115, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 215/219 (98%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRK+FADNGLGDAPFLDRLRRD+KSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKQFADNGLGDAPFLDRLRRDRKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+MTIASVPTSRYL+DMTLEEMSRDWFML+PRQKIIG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMTIASVPTSRYLADMTLEEMSRDWFMLVPRQKIIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAI+EKNI+LKANFSVIFNRLETL+LLRAFTE GAIVGEISPLPSLPGHT EDVKNAVG+ Sbjct 121  QAIIEKNIILKANFSVIFNRLETLVLLRAFTEGGAIVGEISPLPSLPGHTGEDVKNAVGI  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSE++QRFAWRN +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSESLQRFAWRNRNEDGRPSLPPEQK  219

>gb|ABR28663.1| nonstructural protein 1 [Influenza A virus (A/swine/Ontario/4/1981(H1N1))] gb|ABR28674.1| nonstructural protein 1 [Influenza A virus (A/swine/Ontario/7/1981(H1N1))] gb|ABR28718.1| nonstructural protein 1 [Influenza A virus (A/swine/Wisconsin/11/1980(H1N1))] gb|ABW36338.1| nonstructural protein 1 [Influenza A virus (A/swine/Ontario/2/1981(H1N1))] gb|ABW36349.1| nonstructural protein 1 [Influenza A virus (A/swine/Ontario/3/1981(H1N1))] Length=219

Score = 416 bits (1070),  Expect = 5e-115, Method: Compositional matrix adjust. Identities = 201/219 (91%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKMTGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|ABQ45419.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/3/1976(H1N1))] gb|ABQ45430.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/7/1976(H1N1))] gb|ABW36371.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/10/1976(H1N1))] Length=219

Score = 416 bits (1070),  Expect = 5e-115, Method: Compositional matrix adjust. Identities = 199/219 (90%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATL Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLA  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVP+SRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPSSRYLADMTLEEMSRDWFMLMPRQKVAGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+C+ENGRP LPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSCNENGRPPLPPEQK  219

>gb|ACE78065.1| nonstructural protein 1 [Influenza A virus (A/swine/Korea/CY10/2007(H3N2))] Length=219

Score = 416 bits (1070),  Expect = 6e-115, Method: Compositional matrix adjust. Identities = 202/219 (92%), Positives = 210/219 (95%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG TLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGITLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSETL+M IASVPTSRYL+DMTLEEMSRDWFMLMPRQK IG LCVR+D Sbjct 61   GKQIVEWILKEESSETLKMIIASVPTSRYLADMTLEEMSRDWFMLMPRQKTIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKN++LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAV V Sbjct 121  QAIMEKNVILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVEV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR EN+QRFAWRN +ENGRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRSFENLQRFAWRNRNENGRPSLPPEQK  219

>gb|ABY40442.1| nonstructural protein 1 [Influenza A virus (A/swine/Missouri/4296424/2006(H2N3))] Length=219

Score = 416 bits (1068),  Expect = 1e-114, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 212/219 (96%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDS T+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSTTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESS+TL+MTIASVPTSRYL+DMTLEE+SRDW MLMPRQKIIGPLCVR+D Sbjct 61   GKQIVEWILKEESSDTLKMTIASVPTSRYLADMTLEEISRDWLMLMPRQKIIGPLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEG IVGEIS LPSLPGHT EDVKNA+GV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGTIVGEISQLPSLPGHTNEDVKNAIGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPSLPPE+K Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSLPPEKK  219

>gb|ABL75553.1| NS1 protein [Influenza A virus (A/swine/Guangdong/3/2005(H1N1))] Length=219

Score = 416 bits (1068),  Expect = 1e-114, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNTMSSFQVDCF+WHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+T+GLDIETATLV Sbjct 1    MDSNTMSSFQVDCFIWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTIGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPR K+IG L +R+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRGKMIGSLYLRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|AAZ79396.1| nonstructural protein 1 [Influenza A virus (A/swine/Zhejiang/1/2004(H1N2))] Length=219

Score = 416 bits (1068),  Expect = 1e-114, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 212/219 (96%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTS YL+DMTLEEMSRDWFMLMPRQKIIG LC+R+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSHYLADMTLEEMSRDWFMLMPRQKIIGSLCMRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QA MEKNI+LKANFSV+FNRLETLILLRAF+EEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QATMEKNIILKANFSVVFNRLETLILLRAFSEEGAIVGEISPLPSLPGHTEEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWN NTVRVSEN+QRFAWR +E+GRPSLPPEQK Sbjct 181  LIGGLEWNDNTVRVSENLQRFAWRIRNEDGRPSLPPEQK  219

>gb|AAL29789.1| nonstructural protein [Influenza A virus (A/SW/MO/18777/01(H1N2))] Length=219

Score = 415 bits (1066),  Expect = 2e-114, Method: Compositional matrix adjust. Identities = 201/219 (91%), Positives = 211/219 (96%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEESSE L+MTIAS+PTSRYL+DMTLEEMSRDWFMLMPRQKII LCVR+ Sbjct 61   GKQIVEWILKEESSEILKMTIASIPTSRYLADMTLEEMSRDWFMLMPRQKIISSLCVRMG  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRL+TLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLKTLILLRAFTEEGAIVGEISPLPSLPGHTNEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVR SEN+QRFAWRN +E+GRPS PPEQK Sbjct 181  LIGGLEWNGNTVRGSENLQRFAWRNRNEDGRPSPPPEQK  219

>gb|ABS50126.1| nonstructural protein 1 [Influenza A virus (A/swine/Iowa/31483/1988(H1N1))] Length=219

Score = 414 bits (1065),  Expect = 2e-114, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+M+IASVPTSRYL+DM+LEEMSRDWFMLMPRQKI G LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMSIASVPTSRYLADMSLEEMSRDWFMLMPRQKITGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +ENGRPSL PEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNENGRPSLSPEQK  219

>gb|ABY51209.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/4/1978(H1N1))] Length=219

Score = 414 bits (1065),  Expect = 2e-114, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKVTGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +ENGRP LPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNENGRPPLPPEQK  219

>gb|ABR28586.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/82/1977(H1N1))] gb|ABU80226.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/84/1977(H1N1))] gb|ABU80248.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/87/1977(H1N1))] gb|ABU80259.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/88/1977(H1N1))] Length=219

Score = 414 bits (1065),  Expect = 2e-114, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKVAGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +ENGRP LPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNENGRPPLPPEQK  219

>gb|ABW86579.1| nonstructural protein 1 [Influenza A virus (A/swine/Tennessee/5/1978(H1N1))] Length=219

Score = 414 bits (1065),  Expect = 2e-114, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKVAGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPL SLPGHT EDV+NAVGV Sbjct 121  QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVENAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWRN +ENGRP LPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRNRNENGRPPLPPEQK  219

>gb|ABR29580.1| nonstructural protein 1 [Influenza A virus (A/swine/Kansas/3228/1987(H1N1))] gb|ABU80425.1| nonstructural protein 1 [Influenza A virus (A/swine/Kansas/3024/1987(H1N1))] Length=219

Score = 414 bits (1065),  Expect = 2e-114, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DM+LEEMSRDWFMLMPRQKI G LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMSLEEMSRDWFMLMPRQKITGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSL PEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLSPEQK  219

>gb|ACD88697.1| nonstructural protein 1 [Influenza A virus (A/chicken/PA/35154/1991(H1N1))] Length=219

Score = 414 bits (1065),  Expect = 2e-114, Method: Compositional matrix adjust. Identities = 200/219 (91%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRQKVTGSLCVRID  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +ENGRP LPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNENGRPPLPPEQK  219

>dbj|BAH02166.1| nonstructural protein 1 [Influenza A virus (A/swine/Niigata/1/1977(H1N1))] Length=219

Score = 414 bits (1064),  Expect = 3e-114, Method: Compositional matrix adjust. Identities = 198/219 (90%), Positives = 213/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATL Sbjct 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLA  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVP+SRYL+DMTLEEMSRDWFMLMPRQK++G LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPSSRYLADMTLEEMSRDWFMLMPRQKVVGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIF+RLETLILL+AFTEEGAIVGEISPL SLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFDRLETLILLKAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +ENGRP LPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNENGRPPLPPEQK  219

>gb|ABQ45463.1| nonstructural protein 1 [Influenza A virus (A/swine/Iowa/1/1976(H1N1))] Length=219

Score = 414 bits (1064),  Expect = 3e-114, Method: Compositional matrix adjust. Identities = 198/219 (90%), Positives = 212/219 (96%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+TLGL+IETATL Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTLGLNIETATLA  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVP+SRYL+DMTLEEMSRDWFMLMPRQK+ G LCVR+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPSSRYLADMTLEEMSRDWFMLMPRQKVAGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIF+RLETLILLRAFTEEGAIVGEISPL SLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFDRLETLILLRAFTEEGAIVGEISPLLSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+C+ENGR LPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSCNENGRSPLPPEQK  219

>gb|ABR22245.1| nonstructural protein 1 [Influenza A virus (A/Swine/Guangdong/01/2005(H3N2))] Length=219

Score = 414 bits (1063),  Expect = 3e-114, Method: Compositional matrix adjust. Identities = 199/219 (90%), Positives = 214/219 (97%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCF+WHIRKRFADNGLGDAPFLDRLRRDQKSLKGRG+T+GLDIETATLV Sbjct 1    MDSNTVSSFQVDCFIWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGSTIGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILKEES+ETL+MTIASVPTSRYL+DMTLEEMSRDWFMLMPR K+IG L +R+D Sbjct 61   GKQIVEWILKEESNETLKMTIASVPTSRYLADMTLEEMSRDWFMLMPRGKMIGSLYLRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHT EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSEN+QRFAWR+ +E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSENLQRFAWRSRNEDGRPSLPPEQK  219

>gb|AAL29801.1| nonstructural protein [Influenza A virus (A/SW/MN/16419/01(H1N2))] Length=219

Score = 414 bits (1063),  Expect = 3e-114, Method: Compositional matrix adjust. Identities = 201/219 (91%), Positives = 210/219 (95%), Gaps = 0/219 (0%)

Query 1    MDSNTMSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60 MDSNT+SSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV Sbjct 1    MDSNTVSSFQVDCFLWHIRKRFADNGLGDAPFLDRLRRDQKSLKGRGNTLGLDIETATLV  60

Query 61   GKQIVEWILKEESSETLRMTIASVPTSRYLSDMTLEEMSRDWFMLMPRQKIIGPLCVRLD  120 GKQIVEWILK ESSETL+MTIASV TSRYL+DMTLEEMSRDWFMLMPRQK+IG LCVR+D Sbjct 61   GKQIVEWILKGESSETLKMTIASVHTSRYLADMTLEEMSRDWFMLMPRQKVIGSLCVRMD  120

Query 121  QAIMEKNIVLKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHTYEDVKNAVGV  180 QAIMEKNI+LKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGH EDVKNAVGV Sbjct 121  QAIMEKNIILKANFSVIFNRLETLILLRAFTEEGAIVGEISPLPSLPGHIDEDVKNAVGV  180

Query 181  LIGGLEWNGNTVRVSENIQRFAWRNCDENGRPSLPPEQK  219 LIGGLEWNGNTVRVSE++QR WRN  E+GRPSLPPEQK Sbjct 181  LIGGLEWNGNTVRVSESLQRSTWRNRTEDGRPSLPPEQK  219

NS2 Protein Structural Homolgy Model


NS2 Sequence Polymorphisms
All Polymorphisms

NS2 Multiple Sequence Alignment
H1N1 Swine Flu Multiple Sequence Alignment of NS2 Protein, 53 sequences

gi|229299513_A/Texas/05/2009       MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229368685_A/Denmark/513/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|227831790_A/Texas/05/2009       MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229299533_A/Texas/04/2009       MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|227977168_A/California/07/2     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|227977144_A/California/07/2     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|227977112_A/California/04/2     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|227809840_A/California/04/2     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|227977156_A/California/08/2     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|227977124_A/California/08/2     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229396499_A/Ohio/07/2009        MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229536008_A/Kansas/03/2009      MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229396476_A/New_York/19/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229396461_A/Texas/06/2009       MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229396401_A/New_York/31/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229396412_A/New_York/23/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229396386_A/New_York/18/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229396448_A/New_York/15/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229396350_A/New_York/12/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229396372_A/New_York/11/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229396432_A/New_York/10/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229396362_A/New_York/06/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229484057_A/Mexico/InDRE448     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229484060_A/Canada-ON/RV152     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229484055_A/Canada-NS/RV153     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229462704_A/Valencia/GP4/20     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229462716_A/Pais_Vasco/GP20     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229462728_A/Castilla-La_Man     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229462692_A/Castilla-La_Man     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229535810_A/Texas/09/2009       MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229535992_A/South_Carolina/     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229536032_A/Minnesota/02/20     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229536116_A/Michigan/02/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229535828_A/California/14/2     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229536017_A/Arizona/01/2009     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229783408_A/New_York/1682/2     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229783387_A/New_York/1669/2     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229892757_A/Mexico/InDRE411     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229892760_A/Canada-ON/RV152     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229892769_A/Canada-ON/RV152     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229892766_A/Canada-NS/RV153     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229892763_A/Canada-AB/RV153     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|237511857_A/Mexico/4604/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|237511866_A/Mexico/4603/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|237511860_A/Mexico/4486/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|237511872_A/Mexico/4115/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|237511869_A/Mexico/4108/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229783374_A/Korea/01/2009       MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229892755_A/Canada-NS/RV153     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229598887_A/Texas/15/2009       MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|228017754_A/California/06/2     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|229536106_A/Nebraska/02/200     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 gi|237624336_A/swine/Alberta/O     MDSNTMSSFQDILMRMSKMQLGSSSEDLNGMVTRFESLKIYRDSLGETVM 50 **************************************************

gi|229299513_A/Texas/05/2009       RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229368685_A/Denmark/513/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|227831790_A/Texas/05/2009       RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229299533_A/Texas/04/2009       RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|227977168_A/California/07/2     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|227977144_A/California/07/2     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|227977112_A/California/04/2     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|227809840_A/California/04/2     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|227977156_A/California/08/2     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|227977124_A/California/08/2     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229396499_A/Ohio/07/2009        RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229536008_A/Kansas/03/2009      RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229396476_A/New_York/19/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229396461_A/Texas/06/2009       RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229396401_A/New_York/31/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229396412_A/New_York/23/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229396386_A/New_York/18/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229396448_A/New_York/15/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229396350_A/New_York/12/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229396372_A/New_York/11/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229396432_A/New_York/10/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229396362_A/New_York/06/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229484057_A/Mexico/InDRE448     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229484060_A/Canada-ON/RV152     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229484055_A/Canada-NS/RV153     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229462704_A/Valencia/GP4/20     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229462716_A/Pais_Vasco/GP20     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229462728_A/Castilla-La_Man     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229462692_A/Castilla-La_Man     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229535810_A/Texas/09/2009       RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229535992_A/South_Carolina/     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229536032_A/Minnesota/02/20     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229536116_A/Michigan/02/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229535828_A/California/14/2     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229536017_A/Arizona/01/2009     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229783408_A/New_York/1682/2     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229783387_A/New_York/1669/2     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229892757_A/Mexico/InDRE411     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229892760_A/Canada-ON/RV152     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229892769_A/Canada-ON/RV152     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229892766_A/Canada-NS/RV153     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229892763_A/Canada-AB/RV153     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|237511857_A/Mexico/4604/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|237511866_A/Mexico/4603/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|237511860_A/Mexico/4486/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|237511872_A/Mexico/4115/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|237511869_A/Mexico/4108/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229783374_A/Korea/01/2009       RMGDLHYLQSRNKKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229892755_A/Canada-NS/RV153     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|229598887_A/Texas/15/2009       RMGDLHYLQSRNEKWRKQLGQKFEEIRWLIEEMRHRLKATENSFEQITFM 100 gi|228017754_A/California/06/2     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKETENSFEQITFM 100 gi|229536106_A/Nebraska/02/200     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKETENSFEQITFM 100 gi|237624336_A/swine/Alberta/O     RMGDLHYLQSRNEKWREQLGQKFEEIRWLIEEMRHRLKETENSFEQITFM 100 ************:***:********************* ***********

gi|229299513_A/Texas/05/2009       QALQLLLEVEQEIRAFSFQLI 121 gi|229368685_A/Denmark/513/200     QALQLLLEVEQEIRAFS 117 gi|227831790_A/Texas/05/2009       QALQLLLEVEQEIRAFSFQLI 121 gi|229299533_A/Texas/04/2009       QALQLLLEVEQEIRAFSFQLI 121 gi|227977168_A/California/07/2     QALQLLLEVEQEIRAFSFQLI 121 gi|227977144_A/California/07/2     QALQLLLEVEQEIRAFSFQLI 121 gi|227977112_A/California/04/2     QALQLLLEVEQEIRAFSFQLI 121 gi|227809840_A/California/04/2     QALQLLLEVEQEIRAFSFQLI 121 gi|227977156_A/California/08/2     QALQLLLEVEQEIRAFSFQLI 121 gi|227977124_A/California/08/2     QALQLLLEVEQEIRAFSFQLI 121 gi|229396499_A/Ohio/07/2009        QALQLLLEVEQEIRAFSFQLI 121 gi|229536008_A/Kansas/03/2009      QALQLLLEVEQEIRAFSFQLI 121 gi|229396476_A/New_York/19/200     QALQLLLEVEQEIRAFSFQLI 121 gi|229396461_A/Texas/06/2009       QALQLLLEVEQEIRAFSFQLI 121 gi|229396401_A/New_York/31/200     QALQLLLEVEQEIRAFSFQLI 121 gi|229396412_A/New_York/23/200     QALQLLLEVEQEIRAFSFQLI 121 gi|229396386_A/New_York/18/200     QALQLLLEVEQEIRAFSFQLI 121 gi|229396448_A/New_York/15/200     QALQLLLEVEQEIRAFSFQLI 121 gi|229396350_A/New_York/12/200     QALQLLLEVEQEIRAFSFQLI 121 gi|229396372_A/New_York/11/200     QALQLLLEVEQEIRAFSFQLI 121 gi|229396432_A/New_York/10/200     QALQLLLEVEQEIRAFSFQLI 121 gi|229396362_A/New_York/06/200     QALQLLLEVEQEIRAFSFQLI 121 gi|229484057_A/Mexico/InDRE448     QALQLLLEVEQEIRAFSFQLI 121 gi|229484060_A/Canada-ON/RV152     QALQLLLEVEQEIRAFSFQLI 121 gi|229484055_A/Canada-NS/RV153     QALQLLLEVEQEIRAFSFQLI 121 gi|229462704_A/Valencia/GP4/20     QALQLLLEVEQEIRAFSFQLI 121 gi|229462716_A/Pais_Vasco/GP20     QALQLLLEVEQEIRAFSFQLI 121 gi|229462728_A/Castilla-La_Man     QALQLLLEVEQEIRAFSFQLI 121 gi|229462692_A/Castilla-La_Man     QALQLLLEVEQEIRAFSFQLI 121 gi|229535810_A/Texas/09/2009       QALQLLLEVEQEIRAFSFQLI 121 gi|229535992_A/South_Carolina/     QALQLLLEVEQEIRAFSFQLI 121 gi|229536032_A/Minnesota/02/20     QALQLLLEVEQEIRAFSFQLI 121 gi|229536116_A/Michigan/02/200     QALQLLLEVEQEIRAFSFQLI 121 gi|229535828_A/California/14/2     QALQLLLEVEQEIRAFSFQLI 121 gi|229536017_A/Arizona/01/2009     QALQLLLEVEQEIRAFSFQLI 121 gi|229783408_A/New_York/1682/2     QALQLLLEVEQEIRAFSFQLI 121 gi|229783387_A/New_York/1669/2     QALQLLLEVEQEIRAFSFQLI 121 gi|229892757_A/Mexico/InDRE411     QALQLLLEVEQEIRAFSFQLI 121 gi|229892760_A/Canada-ON/RV152     QALQLLLEVEQEIRAFSFQLI 121 gi|229892769_A/Canada-ON/RV152     QALQLLLEVEQEIRAFSFQLI 121 gi|229892766_A/Canada-NS/RV153     QALQLLLEVEQEIRAFSFQLI 121 gi|229892763_A/Canada-AB/RV153     QALQLLLEVEQEIRAFSFQLI 121 gi|237511857_A/Mexico/4604/200     QALQLLLEVEQEIRAFSFQLI 121 gi|237511866_A/Mexico/4603/200     QALQLLLEVEQEIRAFSFQLI 121 gi|237511860_A/Mexico/4486/200     QALQLLLEVEQEIRAFSFQLI 121 gi|237511872_A/Mexico/4115/200     QALQLLLEVEQEIRAFSFQLI 121 gi|237511869_A/Mexico/4108/200     QALQLLLEVEQEIRAFSFQLI 121 gi|229783374_A/Korea/01/2009       QALQLLLEVEQEIRAFSFQLI 121 gi|229892755_A/Canada-NS/RV153     QALQLLLEVEQEIRTFSFQLI 121 gi|229598887_A/Texas/15/2009       QALQLLLEVEQEIRAFSFQLI 121 gi|228017754_A/California/06/2     QALQLLLEVEQEIRAFSFQLI 121 gi|229536106_A/Nebraska/02/200     QALQLLLEVEQEIRAFSFQLI 121 gi|237624336_A/swine/Alberta/O     QALQLLLEVEQEIRAFSFQLI 121 **************:**